mardi 30 août 2016

Discovery of a new antifungal agent ASP2397 using a silkworm model of Aspergillus fumigatus infection

Discovery of a new antifungal agent ASP2397 using a silkworm model of Aspergillus fumigatus infection

The Journal of Antibiotics advance online publication, August 31 2016. doi:10.1038/ja.2016.106

Authors: Ikuko Nakamura, Ryuichi Kanasaki, Koji Yoshikawa, Shigetada Furukawa, Akihiko Fujie, Hiroshi Hamamoto & Kazuhisa Sekimizu



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mardi 23 août 2016

In silico identification of lysocin biosynthetic gene cluster from Lysobacter sp. RH2180-5

In silico identification of lysocin biosynthetic gene cluster from Lysobacter sp. RH2180-5

The Journal of Antibiotics advance online publication, August 24 2016. doi:10.1038/ja.2016.102

Authors: Suresh Panthee, Hiroshi Hamamoto, Yutaka Suzuki & Kazuhisa Sekimizu



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lundi 22 août 2016

Addressing resistance to antibiotics in systematic reviews of antibiotic interventions

Antibiotics are among the most important interventions in healthcare. Resistance of bacteria to antibiotics threatens the effectiveness of treatment. Systematic reviews of antibiotic treatments often do not address resistance to antibiotics even when data are available in the original studies. This omission creates a skewed view, which emphasizes short-term efficacy and ignores the long-term consequences to the patient and other people. We offer a framework for addressing antibiotic resistance in systematic reviews. We suggest that the data on background resistance in the original trials should be reported and taken into account when interpreting results. Data on emergence of resistance (whether in the body reservoirs or in the bacteria causing infection) are important outcomes. Emergence of resistance should be taken into account when interpreting the evidence on antibiotic treatment in randomized controlled trials or systematic reviews.



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The 2016 Garrod Lecture: The role of the healthcare epidemiologist in antimicrobial chemotherapy--a view from the USA

Antimicrobial chemotherapy now spans 80 years and four generations. The healthcare epidemiologist has an important role to play in this field. Efforts focus in three areas: (i) minimizing the transmission of antimicrobial-resistant bacteria in healthcare settings (infection control); (ii) optimizing use of currently available antibacterial drugs (antibiotic stewardship); and (iii) recognizing and responding to opportunities for new drug development. For each area, the epidemiologist provides data that address four practical questions—‘What is the problem?’, ‘What should be done?’, ‘Is it being done?’ and ‘Is it working?’. A team approach is crucial to acting on the epidemiological data. Examples are presented to illustrate different roles of the epidemiologist, and tools and measures that have been developed to address some problems of current importance. Monitoring of quality, integrity and security of data remains a major focus. The epidemiologist will continue to have a key role in antimicrobial chemotherapy.



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Pneumocystis jirovecii pneumonia: still a concern in patients with haematological malignancies and stem cell transplant recipients

Pneumocystis jirovecii can cause life-threatening pneumonia following treatment for haematological malignancies or after HSCT. The mortality rate of P. jirovecii pneumonia (PCP) in these patients is 30%–60%, especially after HSCT. The clinical presentation of PCP in haematology differs from that associated with HIV infection, with the disease being acute and more often severe, having a lower fungal burden and being more frequently linked to treatment with corticosteroids. Most cases occur in patients not receiving adequate prophylaxis. The development of new therapies, including targeted treatments and monoclonal antibodies in various haematological diseases, justifies constant vigilance in order to identify new at-risk populations and give prophylaxis accordingly. The fifth and sixth European Conferences on Infections in Leukaemia (ECIL-5 and ECIL-6) aimed to review risk factors for PCP in haematology patients and to establish evidence-based recommendations for PCP diagnosis, prophylaxis and treatment. This article focuses on the magnitude of the problem, the main differences in clinical presentation between haematology patients and other immunocompromised populations, especially HIV-infected patients, and the main risk factors.



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ECIL guidelines for the diagnosis of Pneumocystis jirovecii pneumonia in patients with haematological malignancies and stem cell transplant recipients

ECIL guidelines for preventing Pneumocystis jirovecii pneumonia in patients with haematological malignancies and stem cell transplant recipients

The 5th European Conference on Infections in Leukaemia (ECIL-5) meeting aimed to establish evidence-based recommendations for the prophylaxis of Pneumocystis jirovecii pneumonia (PCP) in non-HIV-infected patients with an underlying haematological condition, including allogeneic HSCT recipients. Recommendations were based on the grading system of the IDSA. Trimethoprim/sulfamethoxazole given 2–3 times weekly is the drug of choice for the primary prophylaxis of PCP in adults (A-II) and children (A-I) and should be given during the entire period at risk. Recent data indicate that children may benefit equally from a once-weekly regimen (B-II). All other drugs, including pentamidine, atovaquone and dapsone, are considered second-line alternatives when trimethoprim/sulfamethoxazole is poorly tolerated or contraindicated. The main indications of PCP prophylaxis are ALL, allogeneic HSCT, treatment with alemtuzumab, fludarabine/cyclophosphamide/rituximab combinations, >4 weeks of treatment with corticosteroids and well-defined primary immune deficiencies in children. Additional indications are proposed depending on the treatment regimen.



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ECIL guidelines for treatment of Pneumocystis jirovecii pneumonia in non-HIV-infected haematology patients

The initiation of systemic antimicrobial treatment of Pneumocystis jirovecii pneumonia (PCP) is triggered by clinical signs and symptoms, typical radiological and occasionally laboratory findings in patients at risk of this infection. Diagnostic proof by bronchoalveolar lavage should not delay the start of treatment. Most patients with haematological malignancies present with a severe PCP; therefore, antimicrobial therapy should be started intravenously. High-dose trimethoprim/sulfamethoxazole is the treatment of choice. In patients with documented intolerance to this regimen, the preferred alternative is the combination of primaquine plus clindamycin. Treatment success should be first evaluated after 1 week, and in case of clinical non-response, pulmonary CT scan and bronchoalveolar lavage should be repeated to look for secondary or co-infections. Treatment duration typically is 3 weeks and secondary anti-PCP prophylaxis is indicated in all patients thereafter. In patients with critical respiratory failure, non-invasive ventilation is not significantly superior to intubation and mechanical ventilation. The administration of glucocorticoids must be decided on a case-by-case basis.



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Ten years later: still a high prevalence of MRSA in slaughter pigs despite a significant reduction in antimicrobial usage in pigs the Netherlands

A novel resistance mutation in eccC5 of the ESX-5 secretion system confers ofloxacin resistance in Mycobacterium tuberculosis

Description of compensatory gyrA mutations restoring fluoroquinolone susceptibility in Mycobacterium tuberculosis

Loss and gain of aminoglycoside resistance in global clone 2 Acinetobacter baumannii in Australia via modification of genomic resistance islands and acquisition of plasmids

Emergence and evolution of an international cluster of MDR Bacteroides fragilis isolates

Adaptive responses to cefotaxime treatment in ESBL-producing Escherichia coli and the possible use of significantly regulated pathways as novel secondary targets

Glutathione-S-transferase FosA6 of Klebsiella pneumoniae origin conferring fosfomycin resistance in ESBL-producing Escherichia coli

Novel penA mutations identified in Neisseria gonorrhoeae with decreased susceptibility to ceftriaxone isolated between 2000 and 2014 in Japan

Molecular epidemiology and mechanisms of resistance of azithromycin-resistant Neisseria gonorrhoeae isolated in France during 2013-14

Development of a Luminex xTAG(R) assay for cost-effective multiplex detection of {beta}-lactamases in Gram-negative bacteria

Benchmarking of methods for identification of antimicrobial resistance genes in bacterial whole genome data

A novel small-molecule compound disrupts influenza A virus PB2 cap-binding and inhibits viral replication

Comparison of the antifungal activity of micafungin and amphotericin B against Candida tropicalis biofilms

What about confidence intervals? A word of caution when interpreting PTA simulations

Effect of different renal function on antibacterial effects of piperacillin against Pseudomonas aeruginosa evaluated via the hollow-fibre infection model and mechanism-based modelling

A pharmacokinetic-pharmacodynamic model characterizing the emergence of resistant Escherichia coli subpopulations during ertapenem exposure

Pharmacodynamics of carbapenems for the treatment of Pseudomonas aeruginosa ventilator-associated pneumonia: associations with clinical outcome and recurrence

A model-based analysis of the predictive performance of different renal function markers for cefepime clearance in the ICU

Hepatic cyst penetration of cefazolin in patients receiving aspiration sclerotherapy

Characterization of the haematological profile of 21 days of tedizolid in healthy subjects

Microbiological efficacy and tolerability of a single-dose regimen of 1 g of ceftriaxone in men with gonococcal urethritis

Treatment of MDR urinary tract infections with oral fosfomycin: a retrospective analysis

An observational study of the universal use of octenidine to decrease nosocomial bloodstream infections and MDR organisms

Outbreak of IMP-producing carbapenem-resistant Enterobacter gergoviae among kidney transplant recipients

mardi 16 août 2016

Activity of tick antimicrobial peptide from Ixodes persulcatus (persulcatusin) against cell membranes of drug-resistant Staphylococcus aureus

Activity of tick antimicrobial peptide from Ixodes persulcatus (persulcatusin) against cell membranes of drug-resistant Staphylococcus aureus

The Journal of Antibiotics advance online publication, August 17 2016. doi:10.1038/ja.2016.101

Authors: Naruhide Miyoshi, Emiko Isogai, Keiichi Hiramatsu & Takashi Sasaki



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Vestaines, novel vasoactive compounds, isolated from Streptomyces sp. SANK 63697

Vestaines, novel vasoactive compounds, isolated from Streptomyces sp. SANK 63697

The Journal of Antibiotics advance online publication, August 17 2016. doi:10.1038/ja.2016.98

Authors: Yuki Hirota-Takahata, Emi Kurosawa, Yoko Ishimoto, Yuko Iwadate, Masaaki Kizuka, Jun Chiba, Toru Hasegawa, Masahiro Tanaka & Hideki Kobayashi



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mardi 9 août 2016

Germicidins H–J from Streptomyces sp. CB00361

Germicidins H–J from Streptomyces sp. CB00361

The Journal of Antibiotics advance online publication, August 10 2016. doi:10.1038/ja.2016.100

Authors: Ming Ma, Mostafa E Rateb, Dong Yang, Jeffrey D Rudolf, Xiangcheng Zhu, Yong Huang, Li-Xing Zhao, Yi Jiang, Yanwen Duan & Ben Shen



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CD101, a novel echinocandin with exceptional stability properties and enhanced aqueous solubility

CD101, a novel echinocandin with exceptional stability properties and enhanced aqueous solubility

The Journal of Antibiotics advance online publication, August 10 2016. doi:10.1038/ja.2016.89

Authors: B Radha Krishnan, Kenneth D James, Karen Polowy, B J Bryant, Anu Vaidya, Steve Smith & Christopher P Laudeman



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Allantopyrone A activates Keap1–Nrf2 pathway and protects PC12 cells from oxidative stress-induced cell death

Allantopyrone A activates Keap1–Nrf2 pathway and protects PC12 cells from oxidative stress-induced cell death

The Journal of Antibiotics advance online publication, August 10 2016. doi:10.1038/ja.2016.99

Authors: Shota Uesugi, Makoto Muroi, Yasumitsu Kondoh, Yoshihito Shiono, Hiroyuki Osada & Ken-ichi Kimura



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