mercredi 27 juillet 2016

New aliphatic acid amides from Streptomyces maoxianensis sp. nov.

New aliphatic acid amides from Streptomyces maoxianensis sp. nov.

The Journal of Antibiotics advance online publication, July 27 2016. doi:10.1038/ja.2016.90

Authors: Jin-Meng Li, Kai Yan, Hui Zhang, Huan Qi, Ji Zhang, Wen-Sheng Xiang, Ji-Dong Wang & Xiang-Jing Wang



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In vitro activity of tigecycline in combination with rifampin, doripenem or ceftazidime against carbapenem-resistant Klebsiella pneumoniae bloodstream isolates

In vitro activity of tigecycline in combination with rifampin, doripenem or ceftazidime against carbapenem-resistant Klebsiella pneumoniae bloodstream isolates

The Journal of Antibiotics advance online publication, July 27 2016. doi:10.1038/ja.2016.93

Authors: Yongbo Zhang, Peizhen Li, Yuhan Yin, Fuqiang Li & Qinghua Zhang



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Identification of a prodigiosin cyclization gene in the roseophilin producer and production of a new cyclized prodigiosin in a heterologous host

Identification of a prodigiosin cyclization gene in the roseophilin producer and production of a new cyclized prodigiosin in a heterologous host

The Journal of Antibiotics advance online publication, July 27 2016. doi:10.1038/ja.2016.94

Authors: Shoko Kimata, Masumi Izawa, Takashi Kawasaki & Yoichi Hayakawa



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Versicones E–H and arugosin K produced by the mangrove-derived fungus Aspergillus versicolor HDN11-84

Versicones E–H and arugosin K produced by the mangrove-derived fungus Aspergillus versicolor HDN11-84

The Journal of Antibiotics advance online publication, July 27 2016. doi:10.1038/ja.2016.95

Authors: Feng Li, Wenqiang Guo, Qian Che, Tianjiao Zhu, Qianqun Gu & Dehai Li



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jeudi 21 juillet 2016

Editorial: Resurrecting the rubric 'For debate



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Transferable resistance to colistin: a new but old threat

In this Leading article, we summarize current knowledge of the occurrence of the first and so far only transferable colistin resistance gene, mcr-1. Its location on a conjugative plasmid is likely to have driven its spread into a range of enteric bacteria in humans and animals. Screening studies have identified mcr-1 in five of the seven continents and retrospective studies in China have identified this gene in Escherichia coli originally isolated in the 1980s, while the first European isolate dates back to 2005. Based on the widespread use of colistin in pigs and poultry in several countries and the higher number of mcr-1-carrying isolates of animal origin than of human origin, it is tempting to assume that this resistance may have emerged in the animal sector. Whatever its origin, interventions to reduce its further spread will require an integrated global one-health approach, comprising robust antibiotic stewardship to reduce unnecessary colistin use, improved infection prevention, and control and surveillance of colistin usage and resistance in both veterinary and human medicine.



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Bacteriophage therapy: a regulatory perspective

Despite the recognized problem of antibiotic multidrug resistance, very few antibacterial agents with new mechanisms of action are under development. Bacteriophage therapy could offer one alternative strategy to mitigate this challenge. Although widely used throughout the 20th century in Eastern Europe and the former Soviet Union, this potential therapy has not yet been investigated according to rigorous scientific standards. This paper reports on a multistakeholder meeting held at the EMA, which outlined the existing regulatory framework to which such therapy should adhere and reviewed the current obstacles and shortcomings in scientific development for bacteriophage therapy.



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New therapeutic strategies for invasive aspergillosis in the era of azole resistance: how should the prevalence of azole resistance be defined?

Given reports showing a high prevalence of azole resistance in Aspergillus fumigatus, alternatives to azole therapy are discussed when a threshold of 10% of azole-resistant environmental isolates is reached. This raises the issue of calculation of this threshold, either on the prevalence of azole-resistant isolates as a whole or on the prevalence of azole-resistant cases in populations at risk of invasive aspergillosis (IA). For isolate evaluation, there are high disparities in routine microbiological procedures for the isolation of A. fumigatus and azole resistance detection. There are also huge differences between the microbiological work-up for diagnosing IA. Some centres rely on galactomannan detection alone without actively trying to culture appropriate samples, which affects reliability of the figures on the prevalence of resistance and thus the threshold of resistance. Moreover, reports from the laboratory could mix up figures from completely different patient populations: frequent azole-resistant isolates from pneumology patients and rare azole-resistant isolates from haematology patients. Therefore, to sum isolates from different specimens and different wards can lead to erroneous calculations for the restricted populations at risk of developing IA. In conclusion, assessing the incidence of azole resistance in A. fumigatus should be based on harmonized consensual microbiological methods and reports should be restricted to IA episodes in identified populations at risk of IA when the issue is to define an operational threshold for modifying recommendations.



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Azole resistance surveillance in Aspergillus fumigatus: beneficial or biased?

Azole resistance is a growing concern with Aspergillus fumigatus, and may cause increased mortality in patients with azole-resistant invasive aspergillosis (IA). Microbial surveillance has been recognized as a fundamental component of resistance management. Surveillance information may be used to inform decisions regarding health services and research funding allocation, to guide local infection control in hospitals and communities, and to direct local and national drug policies and guidelines. Azole resistance frequencies have been based on screening of unselected A. fumigatus isolates, on the number of azole-resistant cases within a cohort of patients with a specific Aspergillus disease, or on analysis of patients within a specific risk group. The various surveillance approaches differ in their aims, as well as in their associated advantages and drawbacks. Nevertheless, a wide range of azole resistance frequencies has been reported, partly due to the denominator used. As most azole resistance is believed to develop in the environment and, as a consequence, azole-naive patients may present with azole-resistant aspergillosis, experts recommended a 10% resistance frequency threshold above which the standard treatment choice, i.e. voriconazole, should be reconsidered. We believe that local resistance rates based on Aspergillus disease and/or risk group should be leading for decisions regarding empirical antifungal therapy in specific units. In addition, patient factors should be considered, such as admission to the ICU. Collecting valid surveillance data may be challenging in azole resistance due to numerous factors that present potential biases. Surveillance research may benefit from further standardization, which may be facilitated through the recently instituted International Society for Human and Animal Mycology (ISHAM) Aspergillus Resistance Surveillance Working Group.



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Polymorphic substitution E157Q in HIV-1 integrase increases R263K-mediated dolutegravir resistance and decreases DNA binding activity

Pharmacodynamics of anti-HIV gene therapy using viral vectors and targeted endonucleases

Dysregulation of mprF and dltABCD expression among daptomycin-non-susceptible MRSA clinical isolates

Effect of bla regulators on the susceptible phenotype and phenotypic conversion for oxacillin-susceptible mecA-positive staphylococcal isolates

Molecular analysis of Streptococcus pyogenes macrolide resistance of paediatric isolates during a 7 year period (2007-13)

Prevalence and diversity of IncX plasmids carrying fluoroquinolone and {beta}-lactam resistance genes in Escherichia coli originating from diverse sources and geographical areas

CTX-M-15-H30Rx-ST131 subclone is one of the main causes of healthcare-associated ESBL-producing Escherichia coli bacteraemia of urinary origin in Spain

Carbapenemase-producing Escherichia coli is becoming more prevalent in Spain mainly because of the polyclonal dissemination of OXA-48

Population structure of Escherichia coli causing bacteraemia in the UK and Ireland between 2001 and 2010

Dissemination of the blaKPC gene by clonal spread and horizontal gene transfer: comparative study of incidence and molecular mechanisms

Tolerance to multiple metal stressors in emerging non-typhoidal MDR Salmonella serotypes: a relevant role for copper in anaerobic conditions

Subtherapeutic tetracycline concentrations aggravate Salmonella Typhimurium infection by increasing bacterial virulence

Mobilization of the Salmonella genomic island SGI1 and the Proteus genomic island PGI1 by the A/C2 plasmid carrying blaTEM-24 harboured by various clinical species of Enterobacteriaceae

LN-1-255, a penicillanic acid sulfone able to inhibit the class D carbapenemase OXA-48

Unnatural amino acid analogues of membrane-active helical peptides with anti-mycobacterial activity and improved stability

L-Serine potentiates fluoroquinolone activity against Escherichia coli by enhancing endogenous reactive oxygen species production

Engineered cationic antimicrobial peptide (eCAP) prevents Pseudomonas aeruginosa biofilm growth on airway epithelial cells

Standardized interpretation of antibiotic susceptibility testing and resistance genotyping for Mycobacterium abscessus with regard to subspecies and erm41 sequevar

Clostridium difficile clade 5 in Australia: antimicrobial susceptibility profiling of PCR ribotypes of human and animal origin

Clinically relevant concentrations of fosfomycin combined with polymyxin B, tobramycin or ciprofloxacin enhance bacterial killing of Pseudomonas aeruginosa, but do not suppress the emergence of fosfomycin resistance

Delay of antifungal therapy influences the outcome of invasive aspergillosis in experimental models of infection

Voriconazole pharmacokinetics following HSCT: results from the BMT CTN 0101 trial

Treatment with rilpivirine does not alter plasma concentrations of the CYP3A substrates tadalafil and midazolam in humans

Usefulness of an HIV DNA resistance genotypic test in patients who are candidates for a switch to the rilpivirine/emtricitabine/tenofovir disoproxil fumarate combination

Efficacy and safety of once-daily ritonavir-boosted atazanavir or darunavir in combination with a dual nucleos(t)ide analogue backbone in HIV-1-infected combined ART (cART)-naive patients with severe immunosuppression: a 48 week, non-comparative, randomized, multicentre trial (IMEA 040 DATA trial)

mercredi 20 juillet 2016

New tenvermectin analogs obtained by microbial conversion with Saccharopolyspora erythraea

New tenvermectin analogs obtained by microbial conversion with Saccharopolyspora erythraea

The Journal of Antibiotics advance online publication, July 20 2016. doi:10.1038/ja.2016.91

Authors: Xu Wan, Shao-yong Zhang, Hui Zhang, Jun Zhai, Jun Huang, An-liang Chen & Ji-dong Wang



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Polyols, not sugars, determine the structural diversity of anti-streptococcal liamocins produced by Aureobasidium pullulans strain NRRL 50380

Polyols, not sugars, determine the structural diversity of anti-streptococcal liamocins produced by Aureobasidium pullulans strain NRRL 50380

The Journal of Antibiotics advance online publication, July 20 2016. doi:10.1038/ja.2016.92

Authors: Neil PJ Price, Kenneth M Bischoff, Timothy D Leathers, Allard A Cossé & Pennapa Manitchotpisit



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mardi 12 juillet 2016

New cytotoxic trichothecene macrolide epimers from endophytic Myrothecium roridum IFB-E012

New cytotoxic trichothecene macrolide epimers from endophytic Myrothecium roridum IFB-E012

The Journal of Antibiotics advance online publication, July 13 2016. doi:10.1038/ja.2016.86

Authors: Li Shen, Li Zhu, Qingwei Tan, Dan Wan, Ju Xie & Jiangnan Peng



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A model to predict anti-tuberculosis activity: value proposition for marine microorganisms

A model to predict anti-tuberculosis activity: value proposition for marine microorganisms

The Journal of Antibiotics advance online publication, July 13 2016. doi:10.1038/ja.2016.87

Authors: Miaomiao Liu, Tanja Grkovic, Lixin Zhang, Xueting Liu & Ronald J Quinn



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Crystal structure of SgcJ, an NTF2-like superfamily protein involved in biosynthesis of the nine-membered enediyne antitumor antibiotic C-1027

Crystal structure of SgcJ, an NTF2-like superfamily protein involved in biosynthesis of the nine-membered enediyne antitumor antibiotic C-1027

The Journal of Antibiotics advance online publication, July 13 2016. doi:10.1038/ja.2016.88

Authors: Tingting Huang, Chin-Yuan Chang, Jeremy R Lohman, Jeffrey D Rudolf, Youngchang Kim, Changsoo Chang, Dong Yang, Ming Ma, Xiaohui Yan, Ivana Crnovcic, Lance Bigelow, Shonda Clancy, Craig A Bingman, Ragothaman M Yennamalli, Gyorgy Babnigg, Andrzej Joachimiak, George N Phillips & Ben Shen



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mardi 5 juillet 2016

Antibiotic combinations for controlling colistin-resistant Enterobacter cloacae

Antibiotic combinations for controlling colistin-resistant Enterobacter cloacae

The Journal of Antibiotics advance online publication, July 6 2016. doi:10.1038/ja.2016.77

Authors: Thais Bergamin Lima, Osmar Nascimento Silva, Keyla Caroline de Almeida, Suzana Meira Ribeiro, Dielle de Oliveira Motta, Simone Maria-Neto, Michelle Brizolla Lara, Carlos Roberto Souza Filho, Alicia Simalie Ombredane, Celio de Faria Junior, Nadia Skorupa Parachin, Beatriz Simas Magalhães & Octávio Luiz Franco



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Identification and biological activity of ogipeptins, novel LPS inhibitors produced by marine bacterium

Identification and biological activity of ogipeptins, novel LPS inhibitors produced by marine bacterium

The Journal of Antibiotics advance online publication, July 6 2016. doi:10.1038/ja.2016.81

Authors: Shiho Kozuma, Yuki Hirota-Takahata, Daisuke Fukuda, Nahoki Kuraya, Mutsuo Nakajima & Osamu Ando



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Insights into microbial cryptic gene activation and strain improvement: principle, application and technical aspects

Insights into microbial cryptic gene activation and strain improvement: principle, application and technical aspects

The Journal of Antibiotics advance online publication, July 6 2016. doi:10.1038/ja.2016.82

Author: Kozo Ochi



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